Yeast Transfactome

TFDB00000008: CAD1 - CAD1_SM

TFDB00000008: CAD1 - CAD1_SM

Derived from occupancy dataset CAD1_SM from Harbison, C.T., et al. (2004) Nature 431, 99-104. PMID: 15343339

R-squared = 0.04, t-value = 10.07, P-value = 3.65e-24 for fit to the occupancy data.

PSAM derived by scoring both the forward and the complement strands.

View SGD entry for CAD1

Sort by similarity of predicted occupancies:
PSAMs from the Yeast Transfactome database
PSSMs from MacIsaac, K.D., et al. (2006)
PSSMs from TRANSFAC

PSAM matrix values:

	A	C	G	T
0	0.066	0.185	0.736	1.000
1	0.460	0.001	1.000	0.001
2	0.001	0.035	1.000	0.093
3	0.054	0.827	0.001	1.000
4	1.000	0.001	0.001	0.010
5	0.001	1.000	0.076	0.037
6	0.032	0.001	1.000	0.001
7	0.180	0.001	0.001	1.000
8	0.049	0.002	1.000	0.606
9	1.000	0.001	0.008	0.001
10	0.232	1.000	0.656	0.035
11	0.204	1.000	0.283	0.038
12	0.001	1.000	0.002	0.079