Yeast Transfactome



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1:
a. Enter a gene name to score for PSAM matches within the best estimate full length RNA.


OR

b. Enter your own sequence to score. Note that the gene name entry will be disregarded if this sequence box contains input.


2: Select PSAMs from the list at the bottom of the page.

3: After you have made all of your selections, push this button to display the sequence scores.

Select PSAMs


PSAMs are sorted by factor.
Click this button to redo PSAM sorting by

PUF1

    Gerber2004-Puf1_IP_3_ image    PUF1    R-squared = 0.17    t-value = 35.43    P-value = 2.88e-275
TFDB00000402: Puf1 IP (3)  from  Gerber, A.P., et al. (2004) PLoS Biol. 2, E79. PMID: 15024427

    Gerber2004-Puf1_IP_1_ image    PUF1    R-squared = 0.11    t-value = 26.82    P-value = 9.73e-159
TFDB00000400: Puf1 IP (1)  from  Gerber, A.P., et al. (2004) PLoS Biol. 2, E79. PMID: 15024427

    Gerber2004-Puf1_IP_4_ image    PUF1    R-squared = 0.05    t-value = 12.43    P-value = 8.68e-36
TFDB00000403: Puf1 IP (4)  from  Gerber, A.P., et al. (2004) PLoS Biol. 2, E79. PMID: 15024427

    Gerber2004-Puf1_IP_2_ image    PUF1    R-squared = 0.04    t-value = 11.19    P-value = 2.21e-29
TFDB00000401: Puf1 IP (2)  from  Gerber, A.P., et al. (2004) PLoS Biol. 2, E79. PMID: 15024427

PUF2

    Gerber2004-Puf2_IP_1_ image    PUF2    R-squared = 0.10    t-value = 21.75    P-value = 3.79e-105
TFDB00000404: Puf2 IP (1)  from  Gerber, A.P., et al. (2004) PLoS Biol. 2, E79. PMID: 15024427

    Gerber2004-Puf2_IP_4_ image    PUF2    R-squared = 0.08    t-value = 21.39    P-value = 8.59e-102
TFDB00000407: Puf2 IP (4)  from  Gerber, A.P., et al. (2004) PLoS Biol. 2, E79. PMID: 15024427

    Gerber2004-Puf2_IP_2_ image    PUF2    R-squared = 0.07    t-value = 19.05    P-value = 3.21e-81
TFDB00000405: Puf2 IP (2)  from  Gerber, A.P., et al. (2004) PLoS Biol. 2, E79. PMID: 15024427

    Gerber2004-Puf2_IP_3_ image    PUF2    R-squared = 0.07    t-value = 17.84    P-value = 1.68e-71
TFDB00000406: Puf2 IP (3)  from  Gerber, A.P., et al. (2004) PLoS Biol. 2, E79. PMID: 15024427

PUF3

    Gerber2004-Puf3_IP_3_ image    PUF3    R-squared = 0.29    t-value = 49.02    P-value = 0.00e+00
TFDB00000410: Puf3 IP (3)  from  Gerber, A.P., et al. (2004) PLoS Biol. 2, E79. PMID: 15024427

    Gerber2004-Puf3_IP_2_ image    PUF3    R-squared = 0.29    t-value = 48.78    P-value = 0.00e+00
TFDB00000409: Puf3 IP (2)  from  Gerber, A.P., et al. (2004) PLoS Biol. 2, E79. PMID: 15024427

    Gerber2004-Puf3_IP_4_ image    PUF3    R-squared = 0.29    t-value = 48.65    P-value = 0.00e+00
TFDB00000411: Puf3 IP (4)  from  Gerber, A.P., et al. (2004) PLoS Biol. 2, E79. PMID: 15024427

    Gerber2004-Puf3_IP_1_ image    PUF3    R-squared = 0.22    t-value = 40.92    P-value = 0.00e+00
TFDB00000408: Puf3 IP (1)  from  Gerber, A.P., et al. (2004) PLoS Biol. 2, E79. PMID: 15024427

PUF4

    Gerber2004-Puf4_IP_3_ image    PUF4    R-squared = 0.15    t-value = 29.27    P-value = 1.33e-188
TFDB00000414: Puf4 IP (3)  from  Gerber, A.P., et al. (2004) PLoS Biol. 2, E79. PMID: 15024427

    Gerber2004-Puf4_IP_2_ image    PUF4    R-squared = 0.12    t-value = 26.05    P-value = 6.83e-150
TFDB00000413: Puf4 IP (2)  from  Gerber, A.P., et al. (2004) PLoS Biol. 2, E79. PMID: 15024427

    Gerber2004-Puf4_IP_4_ image    PUF4    R-squared = 0.11    t-value = 24.69    P-value = 6.55e-135
TFDB00000415: Puf4 IP (4)  from  Gerber, A.P., et al. (2004) PLoS Biol. 2, E79. PMID: 15024427

    Gerber2004-Puf4_IP_1_ image    PUF4    R-squared = 0.08    t-value = 17.96    P-value = 2.11e-72
TFDB00000412: Puf4 IP (1)  from  Gerber, A.P., et al. (2004) PLoS Biol. 2, E79. PMID: 15024427

PUF5

    Gerber2004-Puf5_IP_3_ image    PUF5    R-squared = 0.14    t-value = 27.89    P-value = 1.69e-171
TFDB00000418: Puf5 IP (3)  from  Gerber, A.P., et al. (2004) PLoS Biol. 2, E79. PMID: 15024427

    Gerber2004-Puf5_IP_4_ image    PUF5    R-squared = 0.14    t-value = 27.84    P-value = 7.39e-171
TFDB00000419: Puf5 IP (4)  from  Gerber, A.P., et al. (2004) PLoS Biol. 2, E79. PMID: 15024427

    Gerber2004-Puf5_IP_2_ image    PUF5    R-squared = 0.13    t-value = 19.38    P-value = 5.64e-84
TFDB00000417: Puf5 IP (2)  from  Gerber, A.P., et al. (2004) PLoS Biol. 2, E79. PMID: 15024427

    Gerber2004-Puf5_IP_1_ image    PUF5    R-squared = 0.12    t-value = 17.15    P-value = 3.08e-66
TFDB00000416: Puf5 IP (1)  from  Gerber, A.P., et al. (2004) PLoS Biol. 2, E79. PMID: 15024427