Yeast Transfactome



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1: Select experiments across which to view trans factor activity profiles (TFAPs).


2: Select PSAMs from the list at the bottom of the page.

3: (optional) Change the display options for the resulting figure. You can choose to cluster the PSAMs and/or the experiments by the similarity of their profiles. You can also change the metric that is used to measure the similarity of profiles. Contrast adjusts the value of the absolute t-value that receives the saturated color. Increments adjusts how many color steps there are between zero and the saturated color.

Cluster: PSAMs Experiments
Cluster Metric:
Contrast:
Increments:

4: After you have made all of your selections, push this button to display the trans factor activity profiles.


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Select PSAMs

PSAMs are sorted by factor.
Click this button to redo PSAM sorting by

PUF1

    Gerber2004-Puf1_IP_3_ image    PUF1    R-squared = 0.17    t-value = 35.43    P-value = 2.88e-275
TFDB00000402: Puf1 IP (3)  from  Gerber, A.P., et al. (2004) PLoS Biol. 2, E79. PMID: 15024427

    Gerber2004-Puf1_IP_1_ image    PUF1    R-squared = 0.11    t-value = 26.82    P-value = 9.73e-159
TFDB00000400: Puf1 IP (1)  from  Gerber, A.P., et al. (2004) PLoS Biol. 2, E79. PMID: 15024427

    Gerber2004-Puf1_IP_4_ image    PUF1    R-squared = 0.05    t-value = 12.43    P-value = 8.68e-36
TFDB00000403: Puf1 IP (4)  from  Gerber, A.P., et al. (2004) PLoS Biol. 2, E79. PMID: 15024427

    Gerber2004-Puf1_IP_2_ image    PUF1    R-squared = 0.04    t-value = 11.19    P-value = 2.21e-29
TFDB00000401: Puf1 IP (2)  from  Gerber, A.P., et al. (2004) PLoS Biol. 2, E79. PMID: 15024427

PUF2

    Gerber2004-Puf2_IP_1_ image    PUF2    R-squared = 0.10    t-value = 21.75    P-value = 3.79e-105
TFDB00000404: Puf2 IP (1)  from  Gerber, A.P., et al. (2004) PLoS Biol. 2, E79. PMID: 15024427

    Gerber2004-Puf2_IP_4_ image    PUF2    R-squared = 0.08    t-value = 21.39    P-value = 8.59e-102
TFDB00000407: Puf2 IP (4)  from  Gerber, A.P., et al. (2004) PLoS Biol. 2, E79. PMID: 15024427

    Gerber2004-Puf2_IP_2_ image    PUF2    R-squared = 0.07    t-value = 19.05    P-value = 3.21e-81
TFDB00000405: Puf2 IP (2)  from  Gerber, A.P., et al. (2004) PLoS Biol. 2, E79. PMID: 15024427

    Gerber2004-Puf2_IP_3_ image    PUF2    R-squared = 0.07    t-value = 17.84    P-value = 1.68e-71
TFDB00000406: Puf2 IP (3)  from  Gerber, A.P., et al. (2004) PLoS Biol. 2, E79. PMID: 15024427

PUF3

    Gerber2004-Puf3_IP_3_ image    PUF3    R-squared = 0.29    t-value = 49.02    P-value = 0.00e+00
TFDB00000410: Puf3 IP (3)  from  Gerber, A.P., et al. (2004) PLoS Biol. 2, E79. PMID: 15024427

    Gerber2004-Puf3_IP_2_ image    PUF3    R-squared = 0.29    t-value = 48.78    P-value = 0.00e+00
TFDB00000409: Puf3 IP (2)  from  Gerber, A.P., et al. (2004) PLoS Biol. 2, E79. PMID: 15024427

    Gerber2004-Puf3_IP_4_ image    PUF3    R-squared = 0.29    t-value = 48.65    P-value = 0.00e+00
TFDB00000411: Puf3 IP (4)  from  Gerber, A.P., et al. (2004) PLoS Biol. 2, E79. PMID: 15024427

    Gerber2004-Puf3_IP_1_ image    PUF3    R-squared = 0.22    t-value = 40.92    P-value = 0.00e+00
TFDB00000408: Puf3 IP (1)  from  Gerber, A.P., et al. (2004) PLoS Biol. 2, E79. PMID: 15024427

PUF4

    Gerber2004-Puf4_IP_3_ image    PUF4    R-squared = 0.15    t-value = 29.27    P-value = 1.33e-188
TFDB00000414: Puf4 IP (3)  from  Gerber, A.P., et al. (2004) PLoS Biol. 2, E79. PMID: 15024427

    Gerber2004-Puf4_IP_2_ image    PUF4    R-squared = 0.12    t-value = 26.05    P-value = 6.83e-150
TFDB00000413: Puf4 IP (2)  from  Gerber, A.P., et al. (2004) PLoS Biol. 2, E79. PMID: 15024427

    Gerber2004-Puf4_IP_4_ image    PUF4    R-squared = 0.11    t-value = 24.69    P-value = 6.55e-135
TFDB00000415: Puf4 IP (4)  from  Gerber, A.P., et al. (2004) PLoS Biol. 2, E79. PMID: 15024427

    Gerber2004-Puf4_IP_1_ image    PUF4    R-squared = 0.08    t-value = 17.96    P-value = 2.11e-72
TFDB00000412: Puf4 IP (1)  from  Gerber, A.P., et al. (2004) PLoS Biol. 2, E79. PMID: 15024427

PUF5

    Gerber2004-Puf5_IP_3_ image    PUF5    R-squared = 0.14    t-value = 27.89    P-value = 1.69e-171
TFDB00000418: Puf5 IP (3)  from  Gerber, A.P., et al. (2004) PLoS Biol. 2, E79. PMID: 15024427

    Gerber2004-Puf5_IP_4_ image    PUF5    R-squared = 0.14    t-value = 27.84    P-value = 7.39e-171
TFDB00000419: Puf5 IP (4)  from  Gerber, A.P., et al. (2004) PLoS Biol. 2, E79. PMID: 15024427

    Gerber2004-Puf5_IP_2_ image    PUF5    R-squared = 0.13    t-value = 19.38    P-value = 5.64e-84
TFDB00000417: Puf5 IP (2)  from  Gerber, A.P., et al. (2004) PLoS Biol. 2, E79. PMID: 15024427

    Gerber2004-Puf5_IP_1_ image    PUF5    R-squared = 0.12    t-value = 17.15    P-value = 3.08e-66
TFDB00000416: Puf5 IP (1)  from  Gerber, A.P., et al. (2004) PLoS Biol. 2, E79. PMID: 15024427